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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931076.1_cds_XP_016477979.1_69660
CDS Infomation

[gene=LOC107799387] [db_xref=GeneID:107799387] [protein=callose synthase 5-like] [partial=5'] [protein_id=XP_016477979.1] [location=complement(join(62381..62611,62926..63111,63231..63281,63403..64200,64391..64620,64693..64805,65548..65631,65723..65838,65912..>65989))] [gbkey=CDS]
Sequence

GTTTTGACATGTCTAATAAGGCATCGCATCTTCCAATTGCAGCGTTTCTTCTNTCTTCAA
ACAATTGACATGAATCAGGACAATTACTTGGAGGAAGCTTTAAAGATGCGTAACCTTCTT
GAGGAGTTTAATGAAGATCACGGAGTGCGTCCACCTACAATATTGGGTGTTCGTGAGCAT
ATCTTCACTGGAAGTGTTTCTTCGTTGGCTTGGTTTATGTCTAATCAAGAGACAAGTTTT
GTCACCATTGGTCAGAGAGTTCTTGCAAGGCCCTTGAAGGTCCGCTTCCACTATGGACAT
CCAGATGTATTTGACAGAATTTTCCACATCACTCGCGGTGGCATTAGCAAAGCTTCAAGG
GGTATCAATCTTAGTGAGGACATATTTGCAGGCTTCAACTCAACATTGCGACGTGGAAAT
GTTACTCACCATGAATACATTCAAGTTGGAAAGGGACGAGATGTTGGTCTTAACCAAATC
TCTCTCTTTGAGGCAAAAGTGGCATGTGGTAATGGAGAGCAGACCCTTAGCCGTGATCTG
TACAGATTAGGGCATCGCTTCGACTTTTTCCGTATGCTGTCCTGTTATTTCACAACTACT
GGATTTTATATCAGCTCAATGCTGGTAGTCCTCACAGTTTATGCATTTTTATATGGTAAA
CTCTACCTTGCATTGAGTGGACTGGAACAGTCCATTGTCAAAGTTGCAAGATCCAAGGGT
GATGATGCTCTCAAAGCTGCAATGGCCTCACAATCTGTTGTTCAACTTGGTTTATTAATG
GCCCTGCCAATGGTTATGGAGATTGGGCTGGAAAGAGGCTTCAGAACTGCTGCAGGTGAT
ATCATCATCATGAACCTGCAGTTGGCTGCTGTCTTCTTTACATTCTCTCTTGGAACAAAG
CTCCATTACTTTGGCCGCACAATTTTACATGGTGGAGCGAAATACAGAGCAACTGGGCGT
GGTTTTGTCGTGAGACACGAAAAGTTTGCTGAGAACTACAGAATGTACTCAAGGAGCCAT
TTCACCAAAGCACTGGAAATTTTGATTTTGCTCGTAGCTTATCAAATTTATGGCACAGCT
GTTACTGATTCTGTAGCTTTCTTGCTTCTCAGTGGCTCAATGTGGTTCCTTGTGGTTTCA
TGGCTGTTTGCTCCTTTCCTCTTTAATCCTTCAGGCTTTGAATGGCAAAAGATAGTGGAT
GATTGGGAGGATTGGGCCAAGTGGATCAGCAATCATGGAGGTATTGGTGTTCCGGCAACC
AAGAGTTGGGAGTCTTGGTGGGATGAGGAACAAGAGCATCTGCAGTATTCTGGTTTGATT
GGCCGCTTCTGTGAAATTCTTCTTGCTCTGCGCTTCTTACTTTTCCAATATGGAATTGTT
TATCAGCTAAATGTGGCCAATAATGATAAGGGTATCATTGTTTATGGTTTGTCCTGGTTG
GTCATTGTGTTCGTCATGGTCGTTTTGAAGATCGTGTCCATGGGTAGGAAGAAGTTCAGT
GCTGATTTCCAGCTGATGTTCAGGCTTCTGAAATTGTTCCTGTTCATTGGCTTCATAGTC
ACACTTGTCGTGCTGTTCAAATTCCTAAGTCTTACTGTTGGAGACATTTTTGCCAGCTTA
TTGGCCTTCTTGCCAACTGGATGGGCTCTTCTTCAGATAGCACAGGCATGTAGGCCAGTA
GTGAAGGGCATAGGTATGTGGGGATCTGTGAAGGCTCTAGCCAGAGGATATGAGTACCTA
ATGGGGCTCGTGATCTTTGCACCTGTGGCTGTTCTTGCTTGGTTCCCATTTGTCTCTGAG
TTCCAGACAAGACTGCTTTTCAACCAGGCTTTCAGCAGAGGGCTTCAGATTCAACGTATT
CTTGCTGGTGGGAAGAAGCACAAGTGA

Peptide Sequence

PEP ID

XP_016477979.1
PEP Infomation

PREDICTED: callose synthase 5-like, partial [Nicotiana tabacum]
Sequence

VLTCLIRHRIFQLQRFFXLQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRPPTILGVREH
IFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASR
GINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDL
YRLGHRFDFFRMLSCYFTTTGFYISSMLVVLTVYAFLYGKLYLALSGLEQSIVKVARSKG
DDALKAAMASQSVVQLGLLMALPMVMEIGLERGFRTAAGDIIIMNLQLAAVFFTFSLGTK
LHYFGRTILHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFTKALEILILLVAYQIYGTA
VTDSVAFLLLSGSMWFLVVSWLFAPFLFNPSGFEWQKIVDDWEDWAKWISNHGGIGVPAT
KSWESWWDEEQEHLQYSGLIGRFCEILLALRFLLFQYGIVYQLNVANNDKGIIVYGLSWL
VIVFVMVVLKIVSMGRKKFSADFQLMFRLLKLFLFIGFIVTLVVLFKFLSLTVGDIFASL
LAFLPTGWALLQIAQACRPVVKGIGMWGSVKALARGYEYLMGLVIFAPVAVLAWFPFVSE
FQTRLLFNQAFSRGLQIQRILAGGKKHK

Transcript Sequence

Gene sequence data has not been registered.